YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DAD1_CITUN
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.76
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARSTGKDAQ ALFHSLRSAY AATPTTLKII DLYVGFAVFT ALIQVVYMAI VGSFPFNSFL  60
   61 SGVLSCVGTA VLAVCLRIQV NKDNKEFKDL PPERAFADFV LCNLVLHLVI MNFLG

Type	Start	End	Confidence
Cytoplasmic	1	28	0.94
Transmembrane Helix	29	51	0.87
Non-Cytoplasmic	52	57	0.80
Transmembrane Helix	58	78	0.93
Cytoplasmic	79	94	0.88
Transmembrane Helix	95	114	0.76
Non-Cytoplasmic	115	115	0.83