YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	DRD2_RAT
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MDPLNLSWYD DDLERQNWSR PFNGSEGKAD RPHYNYYAML LTLLIFIIVF GNVLVCMAVS  60
   61 REKALQTTTN YLIVSLAVAD LLVATLVMPW VVYLEVVGEW KFSRIHCDIF VTLDVMMCTA 120
  121 SILNLCAISI DRYTAVAMPM LYNTRYSSKR RVTVMIAIVW VLSFTISCPL LFGLNNTDQN 180
  181 ECIIANPAFV VYSSIVSFYV PFIVTLLVYI KIYIVLRKRR KRVNTKRSSR AFRANLKTPL 240
  241 KGNCTHPEDM KLCTVIMKSN GSFPVNRRRM DAARRAQELE MEMLSSTSPP ERTRYSPIPP 300
  301 SHHQLTLPDP SHHGLHSNPD SPAKPEKNGH AKIVNPRIAK FFEIQTMPNG KTRTSLKTMS 360
  361 RRKLSQQKEK KATQMLAIVL GVFIICWLPF FITHILNIHC DCNIPPVLYS AFTWLGYVNS 420
  421 AVNPIIYTTF NIEFRKAFMK ILHC

Type	Start	End	Confidence
Non-Cytoplasmic	1	36	0.95
Transmembrane Helix	37	59	0.90
Cytoplasmic	60	70	0.82
Transmembrane Helix	71	92	0.93
Non-Cytoplasmic	93	109	0.88
Transmembrane Helix	110	131	0.88
Cytoplasmic	132	151	0.89
Transmembrane Helix	152	174	0.92
Non-Cytoplasmic	175	190	0.90
Transmembrane Helix	191	213	0.89
Cytoplasmic	214	371	0.99
Transmembrane Helix	372	395	0.88
Non-Cytoplasmic	396	410	0.83
Transmembrane Helix	411	430	0.91
Cytoplasmic	431	444	0.89