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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: kcnl-2
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.60
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSASPMLQHM YSLDESSLMG VSHHSPYRQQ RKRRAGISGA ATGGSHQRDG PFACAGGNGY  60
   61 SSAGFSNGRG FPPLGGRSPQ SSFDSNQDVA QKMMIPRGRT GSRIDLLDPV LRGQKPRRKR 120
  121 VDYDQISMNW MRMNGLGPSL RPFLNSGNHT PKKTVIHNSQ STNHISRIGS LRRMHAADAS 180
  181 IDGKLSLSGT QGDVAAACGE TASRKSVSIA YSNDLEAGGK GNGAIGDDST VPLMDEKDDN 240
  241 SGGRLIRREI LHEKRRHVSD RALAFAIMGI ILMIIENELR TAYVIRPGSS LSHLLKFFII 300
  301 FTTTALLSFV GYFHVIEIQL FMNANAADDW MVALSFRRTC QIGLELLICM LCPLPIEFIA 360
  361 PFMNDRFHDK TLYAVNVFLS IMMFFRLYWL CRVMLLHSRV FTDASSRSIA GLNRVNFNAR 420
  421 FILKTLMTIC PGTMLMIFTA FLWIIAGWIL RLCEREYMTP DKYNDINYVN SIWLVAITFL 480
  481 SVGYGDIVPK TNCGRSMAIV TGILGTCASS MVVAVIARKL ELTRAEKHVH NFMQDTQLTK 540
  541 QLKHSAANVL RETWFIFKFR KLVEKPDFGK IRKHQRKFLL AIYEMRRVRR DQRKLAENLV 600
  601 SLGDVAKTSS NTYELVHDVH STQEGLSLRI TAIEHQLSDI SRELSSLAEL LRGSVIITSD 660
  661 QMSNERKVS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle