YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYBH_RHOCA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.90
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKGVSDERIN APVRGPDEIF EASRLTGDAT REDLESIRRR TSVYVYEAPV RVWHWVNALA  60
   61 ITILVVTGYF IASPLPSMQI GEATDQFVMG YIRFAHFAAG VVMSVAFFGR IYWAFVGNRH 120
  121 AWQMFYIPIF NKRYWKEFVF ELRWYFFLEE EPKKYIGHNP LAHAAMFTFI TLGITFMMIT 180
  181 GWALYAEGAG QGGVTDSLFG WVLGYVQNSQ RLHTLHHLGM WAIVIFAIIH IYAAVREDVM 240
  241 SRQSMVSTMI SGHRTFKDDR IE

Type	Start	End	Confidence
Cytoplasmic	1	51	0.98
Transmembrane Helix	52	73	0.91
Non-Cytoplasmic	74	93	0.89
Transmembrane Helix	94	114	0.96
Cytoplasmic	115	162	0.96
Transmembrane Helix	163	185	0.90
Non-Cytoplasmic	186	213	0.88
Transmembrane Helix	214	235	0.92
Cytoplasmic	236	262	0.91