YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CYBH_BRAJA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.89
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMDAVAPASD AGPDLAAIAA DASGERAVGR PTVYVYEAPV RICHWVNAFS IIVLMVTGYL  60
   61 IGTPLPTVAG EASDNFVMGY IRFAHFAAGQ VLAVFFLTRI LWAFVGNHHS RQIFYIPVHR 120
  121 KQFWKEVLHE IRWYAFLERE PKMYVGHNPL AQTAMFTGFT LFVAFMIVTG FALYSEGQGI 180
  181 DSWQHKLFGW VFAIWPNSQD VHTWHHLGMW ALVVFVMVHI YAAVREDIMS RQSIISSMIS 240
  241 GERQFRD

Type	Start	End	Confidence
Cytoplasmic	1	42	0.98
Transmembrane Helix	43	63	0.89
Non-Cytoplasmic	64	82	0.83
Transmembrane Helix	83	103	0.93
Cytoplasmic	104	152	0.94
Transmembrane Helix	153	174	0.91
Non-Cytoplasmic	175	201	0.96
Transmembrane Helix	202	223	0.92
Cytoplasmic	224	247	0.97