YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CY1_KLULA
Protein type:	Transmembrane
Type Confidence:	0.65
Topology Confidence:	0.50
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRSFSTAAK QAVKGTYVQR AIVGGAAVVG IGASTMLYAD SLTADAMTAA EHGLHAPGYG  60
   61 WSHNGPLETF DHSSIRRGYQ VYREVCAACH SLDRVAWRTM VGVSHTNAEV RAMAEEFEYD 120
  121 DEPDDQGNPK KRPGKLADYV PGPYPNEQAA RAANQGALPP DLSLIVKARH GGPDYIFALL 180
  181 TGYPEEPPAG VVLPPGANYN PYFPGGSIAM GRVLFDDLVE YEDGTPATTS QMAKDVTTFL 240
  241 HWCSEPEHDE RKRLGLKAMI VLSSLYLLSV WVKKFKWASI KSRKIVFNPP KK

Type	Start	End	Confidence
Cytoplasmic	1	16	0.53
Transmembrane Helix	17	39	0.50
Non-Cytoplasmic	40	292	0.89