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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CYS14_NEUCR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.63
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASTSTAGDR IKKFLGIPAD ERLNDTACYV DGSFVESEPT TQDFLNEIRP TVQGTLNYLR  60
   61 ELFPFVNWIF HYNLTWLLGD FIAGVTVGFV VVPQGMAYAK LANLAPEYGL YTSFVGFVLY 120
  121 WAFATSKDIT IGAVAVMSTI VGNIIANVQK DHPDFDAGDI ARTLAFISGA MLLFLGLIRF 180
  181 GFIVEFIPIV AISAFMTGSA ISIAAGQVST LMGIPNINSR EETYKVIINT LKGLPNTHLD 240
  241 AAMGLTALFG LYFIRWFCTQ MGKRYPRQQR AWFFVSTLRM VFIIILYILV SWLVNRHVKD 300
  301 PKKAHFKILG HVPSGFQHKG APRLDNEILS AISGDIPTTI LVLLIEHIAI SKSFGRVNNY 360
  361 IINPSQELVA IGFTNLLGPF LGGYPATGSF SRTAIKAKAG VRTPLAGIFT AVLVLLALYA 420
  421 LTSVFFYIPN SALAAMIIHA VGDLITPPRE VYKFWLTSPL EVVIFFAGVF VSIFTSIENG 480
  481 IYVTVAASGA VLLWRIAKSP GKFLGQTEIY TAPRELVRGS KDSGLTQSLL QKSEHHTAFL 540
  541 SLDRDDLSNP ELQISTPWPG IFVYRFGEGL NYVNSAKHLD NLTIHVFKHT RRTELNKFEK 600
  601 LGDRPWNDPG PRRGQAFLTD ELVSRPTLRA IILDFSAVNC IDVTAAQALQ DLRNQFDRYA 660
  661 HPDKVEWHFA GVSNRWTKRA LVASGFGVDS LRTAKVQREN HKGGVQEVDQ GPLVAIGPSV 720
  721 SASDIEAVPV GTSGSGSTDE KRPEGEGGAT NGGMEKGSAN GEDISTVPTA TSADACALAR 780
  781 DAGGKRLVPV FGINRPFFHI DVATALKSAV RNTGVVAAE

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle