YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CU30_BOMMO
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRVFLAICLS LTVALAAETG KYTPFQYNRV YSTVSPFVYK PGRYVADPGR YDPSRDNSGR  60
   61 YIPDNSGAYN GDRGDRGAAG GFYTGSGTAG GPGGAYVGTK EDLSKYLGDA YKGSSIVPLP 120
  121 VVKPTIPVPV TPTYVASKVV TPTYVASKVV PPSGAGYDYK YGIIRYDNDV APEGYHYLYE 180
  181 TENKILAEEA GKVENIGTEN EGIKVKGFYE YVGPDGVTYR VDYTADENGF VADGAHIPK

Type	Start	End	Confidence
Signal Peptide	1	16	0.99
N-region	1	7
H-region	8	13
C-region	14	16
Cleavage Site	16	17
Non-Cytoplasmic	17	239	0.99