YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|156230895, gi...
Protein type:	Transmembrane
Type Confidence:	0.96
Topology Confidence:	0.85
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSRTNGLSLR RLGIVVALAG VVCLSIMFFW FPPSPTCPPQ FVQRVQHYGS SSAKSSNSLT  60
   61 DTAENKPILL MWFWPEDFRF DLNDCKNIFN IDSCLLTDNR SLYSDADAVL IYHKSISWDL 120
  121 SNLPPSPRPP FQKWIWFHLE SPTNTQKKPG LENLFNHTLS YRQDADIFTR LHLTVRKKPA 180
  181 DDFVIPKKDK LVCWIVSNNA LGTGVGTRNT FYQEFSKHIN VTMFGRAYAS HLDPKDYYPT 240
  241 LASCKFYLSF ENSMHKDYIT EKINGPLSVG TVPVVLGPPR KNYENFYPRD AFIHVQDFPD 300
  301 PKSVAEYLLQ LDKDEDAYRR YFDWRKYYSA TPHLLQQQEF DLPICTACDY IAKHKEYKEI 360
  361 HDLYEWYFN

Type	Start	End	Confidence
Cytoplasmic	1	11	0.85
Transmembrane Helix	12	31	0.94
Non-Cytoplasmic	32	369	0.99