YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|157787149, gi...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.98
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MGVPVKILFL LLLHNSVQGV FTDEATLDLP KNYVIGWMET LNDDKLISEV TVPGTHDTMA  60
   61 LHAGAVAECP PWLLENQLNA GIRYLELRVK GRNLKLVHGV FSQHTTFSDV VDTIKSFLSH 120
  121 YKTEVVLVQV KHESKGPFPD DIANELKNDS DCWVSDKIPL IKGVRGKIVF VQKNSFKLGI 180
  181 PLLETDEKDD NKVGDVRVTE AKDTEHLNED LKDCKADIVV LNYSSGPGWP LLRLDKAPRS 240
  241 LSKEENFWLY TSLSPPNSNP CFGIIAMDCP SFDLIQRIIG FNY

Type	Start	End	Confidence
Signal Peptide	1	19	0.98
N-region	1	10
H-region	11	16
C-region	17	19
Cleavage Site	19	20
Non-Cytoplasmic	20	283	0.99