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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|157841219, gi...
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.86
Topology Confidence: 0.81
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRTQIQRRIL CWRALWLLCF AVLWSDADAQ LRYTIPEELK EGSVVGNVAK DLDLDVSKIS  60
   61 NRKLRIASES GKQYFSLNLR NGELLVNEII DRETLCGQSA RCVLPLQVII EDPLQFYRVE 120
  121 VDIQDINDNS PSFLSDTKFI DVSEATLTGA RFRLEPAQDA DVGSNSLRTY ALNKNDYFIL 180
  181 QVKNDKDGTK VPEIVLQKAL DREKQSILHL ILTGIDGGDP ARSGTTQITV RVLDANDNAP 240
  241 VFEQDLYEIK VMENSAPGTI IQIVKAIDLD DGLNSEIEYS LGSDTPETLK NLFSINSNTG 300
  301 ELTISKSLDY EISTTYKIDI RARDKGGPVM EGHCRVQVNV LDVNDNAPEI IITSSPKPVR 360
  361 ENAPIGTMVA LINVKDLDSG INGNVTLVIS SDTPFKLQPT FANHYALVTD SQLDREKFPK 420
  421 YDIELKASDS GSPPLVSNKL ITVNILDIND NPPAFSERVY SVYIKENSAP GSILASVTAS 480
  481 DLDTGENAKI VYSVLDTNTR DVPSSSYIYI NAENGSMFSM HSFDYEKIKV FHVIVLAKDQ 540
  541 GSPSLSSNAT VHVFILDQND NAPAVIYPST SMGSVSHQRM PRSAKAGHLV TKVTAVDADS 600
  601 GHNAWLFYRL AEATDASLFS VNLHTGEVRT KRAVSEHDDS SQRLVIEIKD NGEPIQSTTV 660
  661 TVDILIEEGI HEPIPEYSMK TEESNSKKNG KITLYLIISL GTVSLFSVLT LFTLIVKCIR 720
  721 SSIGRSSCCI RRTDSGYKNP NRNLQIQLNT DGPIKYVEVL GGDMMSQSQS FGSYLSPMSE 780
  781 FSDLTLIKPS STTNFTDTLN TLDASLPDSA WTFESQQQKP PNTDWRFPPN QRPGPSGQHR 840
  841 FHTLQQRWTP YEKSRAGARP EEAGAGAGVI AGTGPWPNPP TEAEQLQAMM AAANASEATA 900
  901 TLGPRYNLQY GPDYRQNVYI PGSTATLTAN PQQQVLQQAL PPPQALPPTE VPKAAQTPAS 960
  961 KKKPTKKDKK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle