YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB_GEOSL
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.83
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPAGCESNPR LVGHPFMTTI LAIAVFGAVG CVARYLLAGG VYALAGRAFP WGTLAVNVIG  60
   61 AFLIGLIMEA ALRTTLMSQE LRLGLTIGFL GGFTTFSTFS YETFKLLEDG EFFSASLNVL 120
  121 ASVALCLVGT WAGIMAARQL

Type	Start	End	Confidence
Cytoplasmic	1	15	0.89
Transmembrane Helix	16	38	0.90
Non-Cytoplasmic	39	47	0.81
Transmembrane Helix	48	72	0.83
Cytoplasmic	73	80	0.88
Transmembrane Helix	81	101	0.90
Non-Cytoplasmic	102	112	0.81
Transmembrane Helix	113	135	0.90
Cytoplasmic	136	140	0.84