YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|253569647, gi...
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.71
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKTLLFIGM GSFTGGVLRY LISRYVQNFL TPSFPLGTLL VNVLGCFAIG LFYGLFERGN  60
   61 LMNPNLRMFL TVGFCGGFTT FSTFMNENFQ LIKDDNFFYL SLYVGLSLFV GFIMLYLGYS 120
  121 LVKQ

Type	Start	End	Confidence
Cytoplasmic	1	4	0.84
Transmembrane Helix	5	23	0.89
Non-Cytoplasmic	24	33	0.76
Transmembrane Helix	34	56	0.92
Cytoplasmic	57	65	0.83
Transmembrane Helix	66	85	0.93
Non-Cytoplasmic	86	98	0.81
Transmembrane Helix	99	119	0.95
Cytoplasmic	120	124	0.71