YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB3_STRAW
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.88
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRADESGPER ESREPTHIPG AEPELGGEPT PRGEPGPGFE PGPGGEPAPS RAPFRSRLRK  60
   61 GVLAAVALGG VLGGSARYAL GLTFPTPRGT FPVTTFAVNV SGAFLLALLL VYVLEIWPPT 120
  121 RYVRPFAAVG FLGSFTTFST WMVDTDRLLG HGHYAVAAFN VFGSLFAGLA ATGLGLAIGR 180
  181 MALARRVRLA ARHGRARRYG WWVR

Type	Start	End	Confidence
Cytoplasmic	1	60	0.99
Transmembrane Helix	61	81	0.94
Non-Cytoplasmic	82	92	0.82
Transmembrane Helix	93	114	0.93
Cytoplasmic	115	121	0.90
Transmembrane Helix	122	143	0.91
Non-Cytoplasmic	144	160	0.81
Transmembrane Helix	161	184	0.88
Cytoplasmic	185	204	0.99