YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB1_CLOAB
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.46
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKKYILIGLG GAIGAILRCF IRNTKIPVYK GEFPISTLMI NLSGAFILAV ILITANEIWS  60
   61 FNEEIRLGIA TGFVGAYTTF STMCKETIIL MNKNLYFLAF CYVTVSVVFG LLFAYFGALS 120
  121 ARKILSRLLK VRKEDEKAS

Type	Start	End	Confidence
Cytoplasmic	1	4	0.46
Transmembrane Helix	5	24	0.74
Non-Cytoplasmic	25	32	0.37
Transmembrane Helix	33	56	0.85
Cytoplasmic	57	64	0.35
Transmembrane Helix	65	89	0.63
Non-Cytoplasmic	90	95	0.56
Transmembrane Helix	96	119	0.92
Cytoplasmic	120	139	0.59