YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB1_BRADU
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNVPSSAERW RSAMLYAWVS AGSVVGGLTR YLVGLALDTG PGFPFATLFI NATGSLIIGF  60
   61 YATLTGPDGR MLARPEHRQF VMTGFCGGYT TFSAFSLETF RLFHGGMKYI ALAYVASSVV 120
  121 CWLVSVWLGH IMASRYNRLK RS

Type	Start	End	Confidence
Cytoplasmic	1	13	0.94
Transmembrane Helix	14	34	0.94
Non-Cytoplasmic	35	42	0.83
Transmembrane Helix	43	64	0.92
Cytoplasmic	65	79	0.89
Transmembrane Helix	80	100	0.91
Non-Cytoplasmic	101	109	0.79
Transmembrane Helix	110	131	0.95
Cytoplasmic	132	142	0.92