YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CRCB1_BACCR
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.87
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSNLFKEVRK LIYIIVGIAG ILGALSRYYL GLNITTFWHH SFPLATLLIN LIGCFFLAWL  60
   61 TTYIARLNIL PSEVITGIGT GFIGSFTTFS TFSVETVQLI NHSEWSIAFL YVSCSILGGL 120
  121 IMSGLGYTLG DFLIKKSLTE GDYS

Type	Start	End	Confidence
Cytoplasmic	1	10	0.95
Transmembrane Helix	11	31	0.94
Non-Cytoplasmic	32	41	0.79
Transmembrane Helix	42	63	0.90
Cytoplasmic	64	73	0.72
Transmembrane Helix	74	94	0.87
Non-Cytoplasmic	95	106	0.86
Transmembrane Helix	107	129	0.94
Cytoplasmic	130	144	0.95