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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CR2_MOUSE
Protein type: Transmembrane
Type Confidence: 0.96
Topology Confidence: 0.82
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLTWFLFYFS EISCDPPPEV KNARKPYYSL PIVPGTVLRY TCSPSYRLIG EKAIFCISEN  60
   61 QVHATWDKAP PICESVNKTI SCSDPIVPGG FMNKGSKAPF RHGDSVTFTC KANFTMKGSK 120
  121 TVWCQANEMW GPTALPVCES DFPLECPSLP TIHNGHHTGQ HVDQFVAGLS VTYSCEPGYL 180
  181 LTGKKTIKCL SSGDWDGVIP TCKEAQCEHP GKFPNGQVKE PLSLQVGTTV YFSCNEGYQL 240
  241 QGQPSSQCVI VEQKAIWTKK PVCKEILCPP PPPVRNGSHT GSFSENVPYG STVTYTCDPS 300
  301 PEKGVSFTLI GEKTINCTTG SQKTGIWSGP APYCVLSTSA VLCLQPKIKR GQILSILKDS 360
  361 YSYNDTVAFS CEPGFTLKGN RSIRCNAHGT WEPPVPVCEK GCQAPPKIIN GQKEDSYLLN 420
  421 FDPGTSIRYS CDPGYLLVGE DTIHCTPEGK WTPITPQCTV AECKPVGPHL FKRPQNQFIR 480
  481 TAVNSSCDEG FQLSESAYQL CQGTIPWFIE IRLCKEITCP PPPVIHNGTH TWSSSEDVPY 540
  541 GTVVTYMCYP GPEEGVKFKL IGEQTIHCTS DSRGRGSWSS PAPLCKLSLP AVQCTDVHVE 600
  601 NGVKLTDNKA PYFYNDSVMF KCDDGYILSG SSQIRCKANN TWDPEKPLCK KEGCEPMRVH 660
  661 GLPDDSHIKL VKRTCQNGYQ LTGYTYEKCQ NAENGTWFKK IEVCTVILCQ PPPKIANGGH 720
  721 TGMMAKHFLY GNEVSYECDE GFYLLGEKSL QCVNDSKGHG SWSGPPPQCL QSSPLTHCPD 780
  781 PEVKHGYKLN KTHSAFSHND IVHFVCNQGF IMNGSHLIRC HTNNTWLPGV PTCIRKASLG 840
  841 CQSPSTIPNG NHTGGSIARF PPGMSVMYSC YQGFLMAGEA RLICTHEGTW SQPPPFCKEV 900
  901 NCSFPEDTNG IQKGFQPGKT YRFGATVTLE CEDGYTLEGS PQSQCQDDSQ WNPPLALCKY 960
  961 RRWSTIPLIC GISVGSALII LMSVGFCMIL KHRESNYYTK TRPKEGALHL ETREVYSIDP1020
 1021 YNPAS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle