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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPT1B_MOUSE
Protein type: Transmembrane
Type Confidence: 0.92
Topology Confidence: 0.41
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAEAHQAVAF QFTVTPDGVD FRLSREALRH IYLSGINSWK KRLIRIKNGI LRGVYPGSPT  60
   61 SWLVVVMATV GSNYCKVDIS MGLVDCIQRC LPERYGHFGT PQTEALLSMV IFSTGVWATG 120
  121 IFFFRQTLKL LLSYHGWMFE MHSKTSHATK IWAICVRLLS SRRPMLYSFQ TSLPKLPVPS 180
  181 VPATIHRYLD SVRPLLDDEA YYRMETLAKE FQDKTAPRLQ KYLVLKSWWA TNYVSDWWEE 240
  241 YVYLRSRSPL MVNSNYYAMD FVLIKNTNVQ AARLGNAVHA MIMYRRKLDR EEIKPVMALG 300
  301 MVPMCSYQME RMFNTTRIPG KETDLLQHLS ESRHVAVYHK GRFFKVWLYE GSRLLKPRDL 360
  361 EMQFQRILDD PSPPQPGEEK LAALTAGGRV EWAEARQTFF SSGKNKMSLD AIERAAFFVT 420
  421 LDEDSHCYNP DDETSLSLYG KALLHGNCYN RWFDKSFTLI SCKNGLLGLN TEHSWADAPI 480
  481 IGHLWEFVLG TDTFHLGYTE TGHCVGEPNT TLPPPQRLPW DIPEQCREAI ENSYQVAKAL 540
  541 ADDVELYCFQ FLPFGKGLIK KCRTSPDAFV QIALQLAHFR DKGKFCLTYE ASMTRMFREG 600
  601 RTETVRSCTN ESAAFVQAMM KGSHKKQDLQ DLFRKASEKH QNMYRLAMTG AGIDRHLFCL 660
  661 YIVSKYLGVS SPFLAEVLSE PWSLSTSQIP QFQICMFDPK QYPNHLGAGG GFGPVADDGY 720
  721 GVSYMIAGEN TMFFHISSKY SSSETNAQRF GNHIRQALLD IAELFKISKT DS

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle