YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CX6A1_MOUSE
Protein type:	Transmembrane
Type Confidence:	0.77
Topology Confidence:	0.38
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASAVLSASR VSRPLGRALP GLRRPMSSGA HGEEGSARMW KALTYFVALP GVGVSMLNVF  60
   61 LKSRHEEHER PPFVAYPHLR IRTKPFPWGD GNHTLFHNPH VNPLPTGYED E

Type	Start	End	Confidence
Cytoplasmic	1	41	0.38
Transmembrane Helix	42	61	0.74
Non-Cytoplasmic	62	111	0.60