YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CX6A2_RAT
Protein type:	Transmembrane
Type Confidence:	0.91
Topology Confidence:	0.54
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 PLKVLSRSMA SASKGDHGGA GANTWRLLTF VLALPSVALC SLNCWMHAGH HERPEFIPYH  60
   61 HLRIRTKPFS WGDGNHTLFH NPHVNPLPTG YEQP

Type	Start	End	Confidence
Non-Cytoplasmic	1	26	0.61
Transmembrane Helix	27	47	0.84
Cytoplasmic	48	94	0.54