YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COX2_MARPO
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.70
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNLIWIFPIA FCDAAEPWQL GFQDPATPMM QGIIDLHNDI FFFLIVILIF VLWMLVRALW  60
   61 HFHYKRNPIP ERIVHGTTIE IIWTIFPSII LMFIAIPSFA LLYSMDEVVD PAITIKAIGH 120
  121 QWYWTYEYSD YNSSDEQSLT FDSYMIPEDD LELGQLRLLE VDNRVVVPAK THLRMIITSA 180
  181 DVLHSWAVPS LGVKCDAVPG RLNQTSIFIK REGVYYGQCS ELCGTNHGFM PIVVEAVSLD 240
  241 DYVSWVSNKL D

Type	Start	End	Confidence
Non-Cytoplasmic	1	39	0.70
Transmembrane Helix	40	60	0.95
Cytoplasmic	61	80	0.68
Transmembrane Helix	81	103	0.87
Non-Cytoplasmic	104	251	0.78