YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	mt:CoII-PA
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.66
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSTWANLGLQ DSASPLMEQL IFFHDHALLI LVMITVLVGY LMFMLFFNNY VNRFLLHGQL  60
   61 IEMIWTILPA IILLFIALPS LRLLYLLDEI NEPSVTLKSI GHQWYWSYEY SDFNNIEFDS 120
  121 YMIPTNELMT DGFRLLDVDN RVVLPMNSQI RILVTAADVI HSWTVPALGV KVDGTPGRLN 180
  181 QTNFFINRPG LFYGQCSEIC GANHSFMPIV IESVPVNYFI KWISSNNS

Type	Start	End	Confidence
Cytoplasmic	1	20	0.67
Transmembrane Helix	21	47	0.82
Non-Cytoplasmic	48	62	0.56
Transmembrane Helix	63	85	0.83
Cytoplasmic	86	228	0.66