YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COLI1_XENLA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.97
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MFRPLWGCFL AILGICIFHI GEVQSQCWES SRCADLSSED GVLECIKACK TDLSAESPVF  60
   61 PGNGHLQPLS ESIRKYVMTH FRWNKFGRRN STGNDGSNTG YKREDISSYP VFSLFPLSDQ 120
  121 NAPGDNMEEE PLDRQENKRA YSMEHFRWGK PVGRKRRPIK VYPNGVEEES AESYPMELRR 180
  181 ELSLELDYPE IDLDEDIEDN EVESALTKKN GNYRMHHFRW GSPPKDKRYG GFMTPERSQT 240
  241 PLMTLFKNAI IKNSHKKGQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.96
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	259	0.99