YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	COLI_PELRI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLQPVWSCIL ALLGVFIFHV GEVRSQCWES NKCTDLSSED GILECIKACK MDLSAESPVF  60
   61 PGNGHMQPLS ENIRKYVMSH FRWNKFGRRN STSNDNNNGG YKREDIANYP ILNLLTGSDN 120
  121 QNTQQGIMED EAVDRQDSKR SYSMEHFRWG KPVGKKRRPI KVFPTDAEEE SSEIFPLELR 180
  181 RELSLEFDYP DTNSEEDLDD GELLDGPVKK DRKYKMHHFR WEGPPKDKRY GGFMTPERSQ 240
  241 TPLMTLFKNA IIKNAHKKGQ

Type	Start	End	Confidence
Signal Peptide	1	25	0.98
N-region	1	16
H-region	17	22
C-region	23	25
Cleavage Site	25	26
Non-Cytoplasmic	26	260	0.99