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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: COBB_LISIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.78
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKILIAAAS SGAGKTTVTL GIMQALKKRG FAVQPFKVGP DYIDTNYHQA ITGVASINLD  60
   61 SFLIDDDEML ASLFQKHGES ADISVIEGVM GLFDGLGTDR DNASTSFIAK CTKTPVILVV 120
  121 DGKAISTSAA AIVDGFNRFD PELKIAGVII NRVASENHFS LIKGAIERYT DVPVLGYLPK 180
  181 NAAVALPERH LGLVPQEEMT ELEAKWELLS DLITTHVDLD KLLEISKSSE NLSTSKAQMK 240
  241 VADFSGLRVA YALDAAFHFY YQDNLDLIRL TGAELIPFSP LEDNEVPEAD FIYIGGGFPE 300
  301 IFAKQLNDNR SMRKSILAAH EKGIPIYAEC GGLMYLGSSL EMEGKQYEMV GVFNGISKMT 360
  361 TRLRKFGYCI AEPLEETLIG KKGMSIRGHE FHHSVFETTE TACMKLSKKR DGEIVKEWRG 420
  421 GYQKGNTFAS YLHIHFYQNP AILMQMFGAG KR

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle