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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CNG_ICTPU
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.53
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MTGQAALERS VSSHRLSVRS RLEGEAERAE SAISRTDGDD DTCSELQRVT ALELPSAEML  60
   61 EAFTQRRPLA RLVNLVLSLR EWAHKSLVET EQRPDSFLER FRGPQAANDQ SAAPADAPKK 120
  121 TFKERWEGFV VSQSDDIYYY WLFFIALASL YNWIMLVARA CFDQLQDENF FLWVGLDYLC 180
  181 DVIYILDTCI RLRTGYLEQG LLVKDLAKLR DNYIRTLQFK LDFLSILPTE LLFFVTGYVP 240
  241 QLRFNRLLRF SRMFEFFDRT ETRTNYPNAF RICNLILYIL VIIHWNACIY YAISKALGLS 300
  301 SDTWVYSGQN KTLSFCYVYC FYWSTLTLTT IGEMPPPVKD EEYVFVVFDF LVGVLIFATI 360
  361 VGNVGSMIAN MNATRAEFQT RIDAIKHYMH FRKVNRTLET RVIKWFDYLW TNKKTVDEQE 420
  421 VLKNLPDKLR AEIAINVHLD TLKKVRIFQD CEAGLLVELV LKLRPQVYSP GDYICRKGDI 480
  481 GKEMYIIKEG QLAVVADDGV TQFALLTAGG CFGEISILNI QGSKMGNRRT ANIRSIGYSD 540
  541 LFCLSKDDLM EAVAEYPDAQ KVLEERGREI LRKQGLLDES VAAGGLGVID TEEKVERLDA 600
  601 SLDILQTRFA RLLGEFTSTQ RRLKQRITAL ERQLCHTGLG LLSDNEAEGE HAGVPTHTHA 660
  661 DIHAQPETHT RTSAETNSEE ET

YRC Informatics Platform - Version 3.0
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