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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CPDB_HAEIN
Protein type: Globular with Signal Peptide
Type Confidence: 0.98
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MMNRRHFIQI SATSILALSA NRFAMAKGKS DVDLRIVATT DVHSFLTDFD YYKDAPTDKF  60
   61 GFTRAASLIR QARAEVKNSV LVDNGDLIQG NPIADYQAAQ GYKEGKSNPA IDCLNAMNYE 120
  121 VGTLGNHEFN YGLNYLADAI KQAKFPIVNS NVVKAGTEEP YFTPYVIQEK SVVDNQGKTH 180
  181 KLKIGYIGFV PPQIMVWDKA NLQGKVETRD IVKTAQKYVP EMKKKGADIV VALAHTGPSD 240
  241 EPYQEGAENS AFYLADVPHI DAVIFGHSHR LFPNKEFAKS PNADIVNGTV KGIPESMAGY 300
  301 WANNISVVDL GLTEHKGKWI VTSGKAVLRP IYDIETKKAL AKNDPEITAL LKPVHEATRK 360
  361 YVSQPIGKAT DNMYSYLALL QDDPTIQIVN QAQKAYVEKV APSIAAMAGL PILSAGAPFK 420
  421 AGGRKNDPTG YTEVNKGKLT FRNAADLYLY PNTLVVVKAT GEQLKEWLEC SAGMFKQIDP 480
  481 TSDKPQSLID WEGFRTYNFD VIDGVNYEYD LTKPARYDGE CKLINPESHR VVNLTYQGKP 540
  541 VDPKAEFLIA TNNYRAYGNK FPGTGDKHIV YASPDESRQI LADYIKATSE KEGSVNPNAD 600
  601 KNWRFVPITG NDKLDVRFET SPSEQAAKFI AEKAQYPMKQ VGTDEIGFAV YQIDLSK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle