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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CELR2_RAT
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.90
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 EDQVSYTLAI TARDNGIPQK SDTTYLEILV NDVNDNAPQF LRDSYQGSVY EDVPPFTSVL  60
   61 QISATDRDSG LNGRVFYTFQ GGDDGDGDFI VESTSGIVRT LRRLDRENVA QYILRAYAVD 120
  121 KGMPPARTPM EVTVTVLDVN DNPPVFEQDE FDVFVEENSP IGLAVARVTA TDPDEGTNAQ 180
  181 IMYQIVEGNI PEVFQLDIFS GELTALVDLD YEDRPEYILV IQATSAPLVS RATVHVRLLD 240
  241 RNDNPPVLGN FEILFNNYVT NRSSSFPGGA IGRVPAHDPD ISDSLTYSFE RGNELSLVLL 300
  301 NASTGELRLS RALDNNRPLE AIMSVLVSDG VHSVTAQCSL RVTIITDEML THSITLRLED 360
  361 MSPERFLSPL LGLFIQAVAA TLATPPDHVV VFNVQRDTDA PGGHILNVSL SVGQPPGPGG 420
  421 GPPFLPSEDL QERLYLNRSL LTAISAQRVL PFDDNICLRE PCENYMRCVS VLRFDSSAPF 480
  481 IASSSVLFRP IHPVGGLRCR CPPGFTGDYC ETEVDLCYSR PCGPHGHCRS REGGYTCLCR 540
  541 DGYTGEHCEV SARSGRCTPG VCKNGGTCVN LLVGGFKCDC PSGDFEKPFC QVTTRSFPAR 600
  601 SFITFRGLRQ RFHFTLALSF ATKERDGLLL YNGRFNEKHD FVALEVIQEQ VQLTFSAGES 660
  661 TTTVSPFVPG GVSDGQWHTV QLKYYNKPLL GQTGLPQGPS EQKVAVVSVD GCDTGVALRF 720
  721 GAMLGNYSCA AQGTQGGSKK SLDLTGPLLL GGVPDLPESF PVRMRHFVGC MKNLQVDSRH 780
  781 VDMADFIANN GTVPGCPTKK NVCDSNTCHN GGTCVNQWDA FSCECPLGFG GKSCAQEMAN 840
  841 PQRFLGSSLV AWHGLSLPIS QPWHLSLMFR TRQADGVLLQ AVTRGRSTIT LQLRAGHVVL 900
  901 SVEGTGLQAS SLRLEPGRAN DGDWHHAQLS LGASGGPGHA ILSFDYGQQK AEGNLGPRLH 960
  961 GLHLSNMTVG GVPGPASSVA RGFRGCLQGV RVSETPEGVS SLDPSRGESI NVEPGCSWPD1020
 1021 PCDSNPCPTN SYCSNDWDSY SCSCDPGYYG DNCTNVCDLN PCEHQSACTR KPSAPHGYIC1080
 1081 ECLPNYLGPY CETRIDQPCP RGWWGHPTCG PCNCDVSKGF DPDCNKTSGE CHCKENHYRP1140
 1141 PSSPTCLLCD CYPTGSLSRV CDPEDGQCPC KPGVIGRQCD RCDNPFAEVT TNGCEVNYDS1200
 1201 CPRAIEAGIW WPRTRFGLPA AAPCPKGSFG TAVRHCDEHR GWLPPNLFNC TSVTFSELKG1260
 1261 FAERLQRNES GLDSGRSQRL ALLLRNATQH TSGYFGSDVK VAYQLATRLL AHESAQRGFG1320
 1321 LSATQDVHFT ENLLRVGSAL LDAANKRHWE LIQQTEGGTA WLLQHYEAYA SALAQNMRHT1380
 1381 YLSPFTIVTP NIVISVVRLD KGNFAGTKLP RYEALRGERP PDLETTVILP ESVFREMPPM1440
 1441 VRSAGPGEAQ ETEELARRQR RHPELSQGEA VASVIIYHTL AGLLPHNYDP DKRSLRVPKR1500
 1501 PVINTPVVSI SVHDDEELLP RALDKPVTVQ FRLLETEERT KPICVFWNHS ILVSGTGGWS1560
 1561 ARGCEVVFRN ESHVSCQCNH MTSFAVLMDV SRRENGEILP LKTLTYVALG VTLAALMITF1620
 1621 LFLTLLRALR SNQHGIRRNL TAALGLAQLV FLLGINQADL PFACTVIAIL LHFLYLCTFS1680
 1681 WALLEALHLY RALTEVRDVN ASPMRFYYML GWGVPAFITG LAVGLDPEGY GNPDFCWLSI1740
 1741 YDTLIWSFAG PVAFAVSMSV FLYILSARAS CAAQRQGFEK KGPVSGLRSS FTVLLLLSAT1800
 1801 WLLALLSVNS DTLLFHYLFA ACNCVQGPFI FLSYVVLSKE VRKALKFACS RKPSPDPALT1860
 1861 TKSTLTSSYN CPSPYADGRL YQPYGDSAGS LHSASRSGKS QPSYIPFLLR EESTLNPGQV1920
 1921 PPGLGDPSGL FMEGQAQQHD PDTDSDSDLS LEDDQSGSYA STHSSDSEEE EEEAAFPGEQ1980
 1981 GWDSLLGPGA ERLPLHSTPK DGGPGSGKVP WPGDFGTTTK ENSGSGPLEE RPRENGDALT2040
 2041 REGSLGPLPG PSTQPHKGIL KKKCLPTISE KSSLLRLPLE QGTGSSRGST ASEGSRNGPP2100
 2101 PRPPPRQSLQ EQLNGVMPIA MSIKAGTVDE DSSGSEFLFF NFLH

YRC Informatics Platform - Version 3.0
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