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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLPC_PEA
Protein type: Globular with Signal Peptide
Type Confidence: 0.83
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARVLAQSLS VPGLVAGHKD SQHKGSGKSK RSVKTMCALR TSGLRMSGFS GLRTFNHLNT  60
   61 MMRPGLDFHS KVSKAVSSRR ARAKRFIPRA MFERFTEKAI KVIMLAQEEA RRLGHNFVGT 120
  121 EQILLGLIGE GTGIAAKVLK SMGINLKDAR VEVEKIIGRG SGFVAVEIPF TPRAKRVLEL 180
  181 SQEEARQLGH NYIGSEHLLL GLLREGEGVA ARVLENLGAD PTNIRTQVIR MVGESADSVT 240
  241 ATVGSGSSNN KTPTLEEYGT NLTKLAEEGK LDPVVGRQPQ IERVTQILGR RTKNNPCLIG 300
  301 EPGVGKTAIA EGLAQRIANG DVPETIEGKK VITLDMGLLV AGTKYRGEFE ERLKKLMEEI 360
  361 KQSDDIILFI DEVHTLIGAG AAEGAIDAAN ILKPALARGE LQCIGATTLD EYRKHIEKDP 420
  421 DLERRFQPVK VPEPTVDETI QILKGLRERY EIHHKLRYTD EALIAAAQLS YQYISDRFLP 480
  481 DKAIDLVDEA GSRVRLQHAQ LPEEAKELDK EVRKIVKEKE EYVRNQDFEK AGELRDKEMD 540
  541 LKAQISALIE KGKEMSKAET ETADEGPIVT EVDIQHIVSS WTGIPVDKVS ADESDRLLKM 600
  601 EDTLHKRIIG QDEAVQAISR AIRRARVGLK NPNRPIASFI FSGPTGVGKS ELAKALAAYY 660
  661 FGSEEAMIRL DMSEFMERHT VSKLIGSPPG YVGYTEGGQL TEAVRRRPYT VVLFDEIEKA 720
  721 HPDVFNMMLQ ILEDGRLTDS KGRTVDFKNT LLIMTSNVGS SVIEKGGRRI GFDLDYDEKD 780
  781 SSYNRIKSLV TEELKQYFRP EFLNRLDEMI VFRQLTKLEV KEIADIMLKE VFQRLKTKEI 840
  841 ELQVTERFRD RVVDEGYNPS YGARPLRRAI MRLLEDSMAE KMLAREIKEG DSVIVDVDSD 900
  901 GKVIVLNGSS GTPESLPEAL SI

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle