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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CLPAB_SOLLC
Protein type: Globular with Signal Peptide
Type Confidence: 0.73
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MARALVQSTS IPSSVAGERT TKFNGSGKTK RAVTMLCNAQ SSSLTLRDFT GLRGCNAIDT  60
   61 LVRSGETLQS KVAAATYVRR PRGCRFVPKA MFERFTEKAI KVIMLAQEEA RRLGHNFVGT 120
  121 EQILLGLIGE GTGIAAKVLK SMGINLKDAR VEVEKIIGRG SGFVAVEIPF TPRAKRVLEL 180
  181 SLEEARQLGH NYIGSEHLLL GLLREGEGVA ARVLENLGAD PSNIRTQVIR MVGESNEAVG 240
  241 ASVGGGTSGQ KMPTLEEYGT NLTKLAEEGK LDPVVGRQPQ IERVTQILGR RTKNNPCLIG 300
  301 EPGVGKTAIA EGLAQRIANG DVPETIEGKK VITLDMGLLV AGTKYRGEFE ERLKKLMEEI 360
  361 KQSDEIILFI DEVHTLIGAG AAEGAIDAAN ILKPALARGE LQCIGATTLD EYRKHIEKDP 420
  421 ALERRFQPVK VPEPTVDETI QILKGLRERY EIHHKLRYTD EDLVAAAQLS YQYISDRFLP 480
  481 DKAIDLIDEA GSRVRLRHAQ LPEEAKELEK ELRQITKEKN EAVRGQDFEK AGELRDREMD 540
  541 LKAQITALID KNKEVSKAES EAADTGPLVT EADIQHIVSS WTGIPVEKVS TDESDRLLKM 600
  601 EETLHTRIIG QDEAVKAISR AIRRARVGLK NPNRPIASFI FSGPTGVGKS ELAKALAAYY 660
  661 FGSEEAMIRL DMSEFMERHT VSKLIGSPPG YVGYTEGGQL TEAVRRRPYT VVLFDEIEKA 720
  721 HPDVFNMMLQ ILEDGRLTDS KGRTVDFKNT LLIMTSNVGS SVIEKGGRRI GFDLDLDEKD 780
  781 SSYNRIKSLV TEELKQYFRP EFLNRLDEMI VFRQLTKLEV KEIADIMLKE VFERLKVKEI 840
  841 ELQVTERFRD RVVDEGYNPS YGARPLRRAI MRLLEDSMAE KMLANEIKEG DSVIVDVDSD 900
  901 GNVTVLNGSS GTPSDPAPEP IPV

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle