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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHLE_PANTT
Protein type: Globular with Signal Peptide
Type Confidence: 0.89
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQSKGTIISI QFLLRFLLLW VLIGKSHTEE DIIITTKNGK VRGMNLPVLD GTVTAFLGIP  60
   61 YAQPPLGRLR FKKPQFLTKW SDIWNATKHA NSCYQNADQS FPGFPGSEMW NPNTDLSEDC 120
  121 LYLNVWSPTP KPKNATVMIW IYGGGFQTGT SSLPVYDGKF LARVERVIVV SMNYRVGALG 180
  181 FLALPGNPEI PGNMGLFDQQ LALQWVQKNI AAFGGNPKSV TLFGESAGAG SVSLHLLSPR 240
  241 SQPLFTRAIL QSGSSNAPWA VMSLDEAKNR TLTLAKFIGC SKENDTEIIK CLRNKDPQEI 300
  301 LLNELLVVPS DTLLSVNFGP VVDGDFLTDM PDTLLQLGQF KKTQILVGVN KDEGTAFLVY 360
  361 GAPGFSKDND SIITRKEFQE GLKIYFPGVS EFGREAILFY YVDLLDDQRA EKYREALDDV 420
  421 LGDYNIICPA LEFTTKFSEL GNNAFFYYFE HRSSQLPWPE WMGVMHGYEI EFVFGLPLER 480
  481 RVNYTRAEEI LSRSIMNYWA NFAKYGNPNG TQNNSTRWPA FRSTDQKYLT LNAESPKVYT 540
  541 KLRAQQCRFW TLFFPKVLEM TGNIDEAERE WRAGFYRWNN YMMDWKNQFN DYTSKKESCA 600
  601 GL

YRC Informatics Platform - Version 3.0
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