YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CHIA_PHAAN
Protein type:	Globular with Signal Peptide
Type Confidence:	0.93
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKPNMACLKQ VSALLLPLLF ISFFKPSHAG GISVYWGQNG NEGSLADACN TGNYKYVNIA  60
   61 FLFTFGGGQT PQLNLAGHCN PSINNCNVFS DQIKECQSKD IKVLLSLGGA SGSYSLTSAD 120
  121 DATQVANYIW NNFLGGQSSS RPLGDAILDG VDFDIESGTG EHWDDLARAL KGFNSQLLLT 180
  181 AAPQCPIPDA HLDTAIKTGL FDIVWVQFYN NPPCQYSSGN TNDLISSWNQ WTSSQAKQLF 240
  241 LGVPASTAAA GSGFIPADVL TSQVLPTIKG SSKYGGVMLW DRFNDGQSGY SGAIIGSV

Type	Start	End	Confidence
Signal Peptide	1	29	0.99
N-region	1	20
H-region	21	26
C-region	27	29
Cleavage Site	29	30
Non-Cytoplasmic	30	298	0.98