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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHI2_CANAL
Protein type: Globular with Signal Peptide
Type Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLSFKSLLAA AVVASSALAS ASNQVALYWG QNGAGGQERL AQYCQETDVD IVLLSFLNLF  60
   61 PDPLNVNFAN QCGNTFESGL LHCSQIGADI KTCQSLGKTV LLSLGGGVGD YGFSDVASAT 120
  121 KFADTLWNKF GAGEDPERPF DDAVVDGFDF DIEHGGATGY PELATALRGK FAKDTSKNYF 180
  181 LSAAPQCPYP DASLGDLLSK VPLDFAFIQF YNNYCSINGQ FNYDTWSKFA DSAPNKNIKL 240
  241 FVGVPATSNI AGYVDTSKLS SAIEEIKCDS HFAGVSLWDA SGAWLNTDEK GENFVVQVKN 300
  301 VLNQNACVAP SSSATTQSTT TTSSAVTQST TTTSAAITQS ATTTSAAVTT KSNQIVTSSS 360
  361 SSSSSIFYGN STTESSTGIA TGTVLPTGSN ENAATTGSGS NTKLAISTVT DVQKTVITIT 420
  421 SCSEHKCVAT PVTTGVVVVT DIDTVYTTYC PLTNSQVYVP VQTVVCTEET CVPSPTSTAQ 480
  481 KPKASTTIKG VEKGQTTSYP VVGTTEGVKK IVTTSAQTVG SSTKYVTIEL TSTITPVTYP 540
  541 TSVASNGTNT TVPVFTFEGG AAVANSLNSV WFPVPFLLAA FAF

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle