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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CHB_VIBHA
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MLKHSLIAAS VITTLAGCSS LQSSEQQVVN SLADNLDIQY EVLTNHGANE GLACQDMGAE  60
   61 WASCNKVNMT LVNQGEAVDS KDWAIYFHSI RLILDVDNEQ FKISRVTGDL HKLEPTDKFD 120
  121 GFAAGEEVVL PLVGEYWQLF ETDFMPGAFV SAPNAEPKMI ASLNTEDVAS FVTGLEGNNL 180
  181 KRTPDDNNVF ANAVSRFEKN EDLATQDVST TLLPTPMHVE AGKGKVDIAD GIALPKDAFD 240
  241 ATQFAAIQDR AEVVGVDVRG DLPVSITVVP ADFTGELAKS GAYEMSIKGD GIVIKAFDQA 300
  301 GAFYAVQSIF GLVDSQNADS LPQLSIKDAP RFDYRGVMVD VARNFHSKDA ILATLDQMAA 360
  361 YKMNKLHLHL TDDEGWRLEI PGLPELTEVG ANRCFDTQEK SCLLPQLGSG PTTDNFGSGY 420
  421 FSKADYVEIL KYAKARNIEV IPEIDMPAHA RAAVVSMEAR YDRLMEEGKE AEANEYRLMD 480
  481 PQDTSNVTTV QFYNKQSFIN PCMESSTRFV DKVISEVAAM HQEAGAPLTT WHFGGDEAKN 540
  541 IKLGAGFQDV NAEDKVSWKG TIDLSKQDKP FAQSPQCQTL ITDGTVSDFA HLPSHFAEEV 600
  601 SKIVAEKGIP NFQAWQDGLK YSDGEKAFAT ENTRVNFWDV LYWGGTSSVY EWSKKGYDVI 660
  661 VSNPDYVYMD MPYEVDPKER GYYWATRATD TRKMFGFAPE NMPQNAETSV DRDGNGFTGK 720
  721 GEIEAKPFYG LSAQLWSETV RNDEQYEYMV FPRVLAAAQR AWHRADWEND YKVGVEYSQN 780
  781 SNLVDKASLN QDYNRFANVL GQRELAKLEK SGIDYRLPVP GAKVEDGKLA MNVQFPGVTL 840
  841 QYSLDGENWL TYADNARPNV TGEVFIRSVS ATGEKVSRIT SVK

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle