YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CH36_DROVI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLGLWFGLF AVAAAPLVSA NYGSPGRGAG RQIQYLPGGP SEGLEEYVNA ATGGSQPSAN  60
   61 QLTAQAEIQI VGEARRLGRV QAQLQALNNN PTYQKLKNSE DIAESLAETN LASNIRQGKI 120
  121 NVVSPQFVDQ HLFRSLLVPS GHNNHQVIAT QPLPPIIVHQ PGAPPAHVNS GPPTVVRGNP 180
  181 VIYKIKPSVI YQQEVINKVP TPLSLNPVYV KVYKPGKKIE APLAPVVAPV YSQPQSYGQP 240
  241 QAYNQPQAYS QPQSYGNSGS SGAGNSGPSS DSYAAGAETP LYASPAPYGS PSY

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	293	0.99