YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	gi\|103109, gi\|77...
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MQLGLWFGIL AIAAAPLVSA NYGPAGGHGH GHGHGHGQYL SGPNAGLEEY VNVASGGNQQ  60
   61 AANQIASQAE IQPTPEEARR LGRVQAQLQA LNADPNYQKL KNSEDIAESL AETNLASNIR 120
  121 QGKIKVVSPQ FVDQHLFRSL LVPSGHNNHQ VIATQPLPPI IVHQPGAPPA HVNSGPPTVV 180
  181 RGNPVIYKIK PSVIYQQEVI NKVPTPLSLN PVYVKVYKPG KKIEAPLAPV VAPVYSQPRE 240
  241 YSQPQGYGSA GAASSAAGAA SSADGNAYGN EAPLYNSPAP YGQPNY

Type	Start	End	Confidence
Signal Peptide	1	20	0.99
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	286	0.99