YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CH19_DROVI
Protein type:	Globular with Signal Peptide
Type Confidence:	0.99
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MNKFATLAVF ISVCLAVGSC NYGGQHAGHG YGHHRSISSY GQRGDGSAAA ASSAAAAGGN  60
   61 DQRPVEIVAG PRYGGSEQLR PILLDSGYQG GHNEYGRGHG NIGHLVGGGS YGGHIAGGNH 120
  121 GGNYGGHQRG YGRPRWSVQP AGTTLLYPGQ NSYRRYASPP EYTKVVLPVR AAPPVAKLYL 180
  181 PENNYGSHGG YHNEGPKY

Type	Start	End	Confidence
Signal Peptide	1	20	0.93
N-region	1	11
H-region	12	17
C-region	18	20
Cleavage Site	20	21
Non-Cytoplasmic	21	198	0.99