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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: FGFR2_CHICK
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.79
Topology Confidence: 0.67
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MVSWDSGCLI CLVVVTMAGL SLARPSFNLV VEDATLEPEE PPTKYQISQP DVHSALPGEP  60
   61 LELRCQLKDA VMISWTKDGV PLGPDNRTVI IGEYLQIKDA SPRDSGLYAC TAIRTLDSDT 120
  121 LYFIVNVTDA LSSGDDEDDN DGSEDFVNDS NQMRAPYWTH TDKMEKRLHA VPAANTVKFR 180
  181 CPAMGNPTPT MRWLKNGKEF KQEHRIGGYK VRNQHWSLIM ESVVPSDKGN YTCIVENQYG 240
  241 SINHTYHLDV VERSPHRPIL QAGLPANASA VVGGDVEFVC KVYSDAQPHI QWIKHVERNG 300
  301 SKYGPDGLPY LQVLKAAGVN TTDKEIEVLY IRNVTFEDAG EYTCLAGNSI GISFHTAWLT 360
  361 VLPAPEKEKE FPTSPDYLEI AIYCIGVFLI ACMVLTVILC RMKNTTKKPD FSSQPAVHKL 420
  421 TKRIPLRRQV TVSADSSSSM NSNTPLVRIT TRLSSTADAP MLAGVSEYEL PEDPKWEFPR 480
  481 DKLTLGKPLG EGCFGQVVMA EAVGIDKDRP KEAVTVAVKM LKDDATEKDL SDLVSEMEMM 540
  541 KMIGKHKNII NLLGACTQDG PLYVIVEYAS KGNLREYLRA RRPPGMEYSF DINRVPEEQM 600
  601 TFKDLVSCTY QLARGMEYLA SQKCIHRDLA ARNVLVTENN VMKIADFGLA RDINNIDYYK 660
  661 KTTNGRLPVK WMAPEALFDR VYTHQSDVWS FGVLMWEIFT LGGSPYPGIP VEELFKLLKE 720
  721 GHRMDKPANC TNELYMMMRD CWQAVPSQRP TFKQLVEDLD RILTLTTNEE YLDLSGPLEQ 780
  781 YSPSYPDTRS SCSSGDDSVF SPDPMPYEPC LPKYQHMNGS VKT

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle