YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CEA_ECOLX
Protein type:	Transmembrane
Type Confidence:	0.99
Topology Confidence:	0.91
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 VAEKAKDERE LLEKTSELIA GMGDKIGEHL GDKYKAIAKD IADNIKNFQG KTIRSFDDAM  60
   61 ASLNKITANP AMKINKADRD ALVNAWKHVD AQDMANKLGN LSKAFKVADV VMKVEKVREK 120
  121 SIEGYETGNW GPLMLEVESW VLSGIASSVA LGIFSATLGA YALSLGVPAI AVGIAGILLA 180
  181 AVVGALIDDK FADALNNEII RPAH

Type	Start	End	Confidence
Cytoplasmic	1	139	0.97
Transmembrane Helix	140	161	0.91
Non-Cytoplasmic	162	166	0.70
Transmembrane Helix	167	187	0.92
Cytoplasmic	188	204	0.91