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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CEA_CITFR
Protein type: Transmembrane
Type Confidence: 0.99
Topology Confidence: 0.51
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPGFNYGGKG DGTGWSSERG SGPEPGGGSH GNSGGHDRGD SSNVGNESVT VMKPGDSYNT  60
   61 PWGKVIINAA GQPTMNGTVM TADNSSMVPY GRGFTRVLNS LVNNPVSPAG QNGGKSPVQT 120
  121 AVENYLMVQS GNLPPGYWLS NGKVMTEVRE ERTSGGGGKN GNERTWTVKV PREVPQLTAS 180
  181 YNEGMRIRQE AADRARAEAN ARALAEEEAR AIASGKSKAE FDAGKRVEAA QAAINTAQLN 240
  241 VNNLSGAVSA ANQVITQKQA EMTPLKNELA AANQRVQETL KFINDPIRSR IHFNMRSGLI 300
  301 RAQHNVDTKQ NEINAAVANR DALNSQLSQA NNILQNARNE KSAADAALSA ATAQRLQAEA 360
  361 ALRAAAEAAE KARQRQAEEA ERQRQAMEVA EKAKDERELL EKTSELIAGM GDKIGEHLGD 420
  421 KYKAIAKDIA DNIKNFQGKT IRSFDDAMAS LNKITANPAM KINKADRDAL VNAWKHVDAQ 480
  481 DMANKLGNLS KAFKVADVVM KVEKVREKSI EGYETGNWGP LMLEVESWVL SGIASSVALG 540
  541 IFSATLGAYA LSLGVPAIAV GIAGILLAAV VGALIDDKFA DALNNEIIRP AH

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle