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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CDGT_GEOSE
Protein type: Globular with Signal Peptide
Type Confidence: 0.99
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRRWLSLVLS MSFVFSAIFI VSDTQKVTVE AAGNLNKVNF TSDVVYQIVV DRFVDGNTSN  60
   61 NPSGALFSSG CTNLRKYCGG DWQGIINKIN DGYLTDMGVT AIWISQPVEN VFSVMNDASG 120
  121 SASYHGYWAR DFKKPNPFFG TLSDFQRLVD AAHAKGIKVI IDFAPNHTSP ASETNPSYME 180
  181 NGRLYDNGTL LGGYTNDANM YFHHNGGTTF SSLEDGIYRN LFDLADLNHQ NPVIDRYLKD 240
  241 AVKMWIDMGI DGIRMDAVKH MPFGWQKSLM DEIDNYRPVF TFGEWFLSEN EVDANNHYFA 300
  301 NESGMSLLDF RFGQKLRQVL RNNSDNWYGF NQMIQDTASA YDEVLDQVTF IDNHDMDRFM 360
  361 IDGGDPRKVD MALAVLLTSR GVPNIYYGTE QYMTGNGDPN NRKMMSSFNK NTRAYQVIQK 420
  421 LSSLRRNNPA LAYGDTEQRW INGDVYVYER QFGKDVVLVA VNRSSSSNYS ITGLFTALPA 480
  481 GTYTDQLGGL LDGNTIQVGS NGSVNAFDLG PGEVGVWAYS ATESTPIIGH VGPMMGQVGH 540
  541 QVTIDGEGFG TNTGTVKFGT TAANVVSWSN NQIVVAVPNV SPGKYNITVQ SSSGQTSAAY 600
  601 DNFEVLTNDQ VSVRFVVNNA TTNLGQNIYI VGNVYELGNW DTSKAIGPMF NQVVYSYPTW 660
  661 YIDVSVPEGK TIEFKFIKKD SQGNVTWESG SNHVYTTPTN TTGKIIVDWQ N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle