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View Philius Transmembrane Prediction Details

Prediction Overview

Protein: CCMH_ECOLI
Protein type: Transmembrane with Signal Peptide
Type Confidence: 0.99
Topology Confidence: 0.88
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MRFLLGVLML MISGSALATI DVLQFKDEAQ EQQFRQLTEE LRCPKCQNNS IADSNSMIAT  60
   61 DLRQKVYELM QEGKSKKEIV DYMVARYGNF VTYDPPLTPL TVLLWVLPVV AIGIGGWVIY 120
  121 ARSRRRVRVV PEAFPEQSVP EGKRAGYVVY LPGIVVALIV AGVSYYQTGN YQQVKIWQQA 180
  181 TAQAPALLDR ALDPKADPLN EEEMSRLALG MRTQLQKNPG DIEGWIMLGR VGMALGNASI 240
  241 ATDAYATAYR LDPKNSDAAL GYAEALTRSS DPNDNRLGGE LLRQLVRTDH SNIRVLSMYA 300
  301 FNAFEQQRFG EAVAAWEMML KLLPANDTRR AVIERSIAQA MQHLSPQESK 

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle