YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CB2G_SOLLC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.39
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MATSTMALSS STFAGKAVKL SPSSSEITGN GRVTMRKTAT KAKPASSGSP WYGPDRVKYL  60
   61 GPFSGESPSY LTGEFPGDYG WDTAGLSADP ETFAKNRELE VIHCRWAMLG ALGCVFPELL 120
  121 ARNGVKFGEA VWFKAGSQIF SEGGLDYLGN PSLVHAQSIL AIWACQVVLM GAVEGYRIAG 180
  181 GPLGEVVDPL YPGGSFDPLG LADDPEAFAE LKVKEIKNGR LAMFSMFGFF VQAIVTGKGP 240
  241 LENLADHLAD PVNNNAWAFA TNFVPGK

Type	Start	End	Confidence
Signal Peptide	1	17	0.40
N-region	1	8
H-region	9	14
C-region	15	17
Cleavage Site	17	18
Non-Cytoplasmic	18	267	0.66