YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CB24_TOBAC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.33
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MAASTMALSS PSFAGKAVKL SPSSSEITGN GKVTMRKTAS KAKTVSSGSP WYGPDRVKYL  60
   61 GPFSGESPSY LTGEFPGDYG WDTAGLSADP ETFAKNRELE VIHCRWAMLG ALGCVFPELL 120
  121 ARNGVKFGEA VWFKAGSQIF SEGGLDYLGN PSLVHAQSIL AIWACQVVLM GAVEGYRVAG 180
  181 GPLGEVVDPL YPGGSFDPLG LAEDPEAFAE LKVKEIKNGR LAMFSMFGFF VQAIVTGKGP 240
  241 LENLADHLAD PVNNNAWAYA TNFVPGK

Type	Start	End	Confidence
Signal Peptide	1	14	0.35
N-region	1	5
H-region	6	11
C-region	12	14
Cleavage Site	14	15
Non-Cytoplasmic	15	267	0.66