YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CB12_SOLLC
Protein type:	Globular with Signal Peptide
Type Confidence:	0.81
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MASACASSTI AAVAFSSPSS RRNGSIVGTT KASFLGGRRL RVSKYSTTPT ARSATTVCVA  60
   61 ADPDRPLWFP GSTPPPWLDG SLPGDFGFDP LGLASDPESL RWNQQAELVH CRWAMLGAAG 120
  121 IFIPELLTKI GILNTPSWYT AGEQEYFTDT TTLFIVELVL IGWAEGRRWA DIIKPGCVNT 180
  181 DPIFPNNKLT GTDVGYPGGL WFDPLGWGSG SPAKIKELRT KEIKNGRLAM LAVMGAWFQH 240
  241 IYTGTGPIDN LFAHLADPGH ATIFAAFSPK

Type	Start	End	Confidence
Signal Peptide	1	21	0.84
N-region	1	12
H-region	13	18
C-region	19	21
Cleavage Site	21	22
Non-Cytoplasmic	22	270	0.88