YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CATD_CLUHA
Protein type:	Globular with Signal Peptide
Type Confidence:	0.95
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKFLYLFLFA VFAWTSDAIV RIPLKKFRSI RRTLSDSGLN VEQLLAGTNS LQHNQGFPSS  60
   61 NAPTPETLKN YMDAQYYGEI GLGTPVQMFT VVFDTGSSNL WLPSIHCSFT DIACLLHHKY 120
  121 NGAKSSTYVK NGTEFAIQYG SGSLSGYLSQ DSCTIGDIVV EKQLFGEAIK QPGVAFIAAK 180
  181 FDGILGMAYP RISVDGVPPV FDMMMSQKKV EQNVFSFYLN RNPDTEPGGE LLLGGTDPKY 240
  241 YTGDFNYVPV TRQAYWQIHM DGMSIGSQLT LCKDGCEAIV DTGTSLITGP PAEVRALQKA 300
  301 IGAIPLIQGE YMIDCKKVPT LPTISFNVGG KTYSLTGEQY VLKESQGGKT ICLSGLMGLE 360
  361 IPPPAGPLWI LGDVFIGQYY TVFDRESNRV GFAKST

Type	Start	End	Confidence
Signal Peptide	1	18	0.98
N-region	1	9
H-region	10	15
C-region	16	18
Cleavage Site	18	19
Non-Cytoplasmic	19	396	0.99