YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CASB_CAMDR
Protein type:	Globular with Signal Peptide
Type Confidence:	0.84
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MKVLILACRV ALALAREKEE FKTAGEALES ISSSEESITH INKQKIEKFK IEEQQQTEDE  60
   61 QQDKIYTFPQ PQSLVYSHTE PIPYPILPQN FLPPLQPAVM VPFLQPKVMD VPKTKETIIP 120
  121 KRKEMPLLQS PVVPFTESQS LTLTDLENLH LPLPLLQSLM YQIPQPVPQT PMIPPQSLLS 180
  181 LSQFKVLPVP QQMVPYPQRA MPVQAVLPFQ EPVPDPVRGL HPVPQPLVPV IA

Type	Start	End	Confidence
Signal Peptide	1	15	0.84
N-region	1	6
H-region	7	12
C-region	13	15
Cleavage Site	15	16
Non-Cytoplasmic	16	232	0.99