YRC Logo
PROTEIN SEARCH:
Descriptions Names[Advanced Search]

View Philius Transmembrane Prediction Details

Prediction Overview

Protein: gi|11272706
Protein type: Globular with Signal Peptide
Type Confidence: 0.71
From Publication: Reynolds et al. (2008)


Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)


Philius confidence legend

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MPKRTDLKSI LIIGAGPIVI GQACEFDYSG AQACKALREE GYKVILVNSN PATIMTDPEM  60
   61 ADVTYIEPIM WQTVEKIIAK ERPDAILPTM GGQTALNCAL DLARNGVLAK YNVELIGATE 120
  121 DAIDKAEDRG RFKEAMEKIG LSCPKSFVCH TMNEALAAQE QVGFPTLIRP SFTMGGSGGG 180
  181 IAYNKDEFLA ICERGFDASP THELLIEQSV LGWKEYEMEV VRDKNDNCII ICSIENFDPM 240
  241 GVHTGDSITV APAQTLTDKE YQIMRNASLA VLREIGVDTG GSNVQFAVNP ANGEMIVIEM 300
  301 NPRVSRSSAL ASKATGFPIA KVAAKLAVGF TLDELRNDIT GGKTPASFEP SIDYVVTKIP 360
  361 RFAFEKFPAA DDRLTTQMKS VGEVMAMGRT IQESFQKALR GLETGLCGFN PRSEDKAEIR 420
  421 RELANPGPER MLFVADAFRA GFTLEEIHEI CAIDPWFLAQ IEDLMKEEKA VSDGILSDLD 480
  481 FAALRRLKRK GFSDKRLAQL LNVSEKEVRE HRYALKLHPV YKRVDTCAAE FATETAYLYS 540
  541 TYEEECESRP SDRKKVMILG GGPNRIGQGI EFDYCCVHAA LALRESGFET IMVNCNPETV 600
  601 STDFDTSDRL YFEPLTLEDV LEIVRTENPW GVIVHYGGQT PLKLANALVE NGVNIIGTSA 660
  661 DSIDAAEDRE RFQKVLNDLG LRQPPNRIAH NEEEALVKAE EIGYPLVVRP SYVLGGRAMQ 720
  721 VVHSAEELQK YMREAVQVSE DSPVLLDFFL NNAIEVDVDC VSDGKDVVIG GIMQHVEQAG 780
  781 IHSGDSGCSL PPYSLSEEIQ DEIRRQTKAM AYALGVVGLM NVQFAVQDGV VFVLEVNPRA 840
  841 SRTVPFVSKA TGVPLAKVGA RCMAGISLKE QGVEKEVVPD FYAVKEAVFP FIKFPGVDTI 900
  901 LGPEMRSTGE VMGVGASFGE AYYKAQLGAG ERLNPTGKIF LSVREEDKER VIKTAKNFQV 960
  961 LGYGICATRG TAQYLTEHGL IVQTINKVPE GRPHIGDALK NGEIALVVNT VSSDPQSVSD1020
 1021 SHIIRQSALQ QRVPQYTTTA GGEAMSEGAK SRDHLGVYSV QELHGRLKNR N

YRC Informatics Platform - Version 3.0
Created and Maintained by: Michael Riffle