YRC Public Data Repository - View Philius Transmembrane Prediction Details

Prediction Overview

Protein:	CAIE_ECOLI
Protein type:	Transmembrane
Type Confidence:	0.82
Topology Confidence:	0.67
From Publication:	Reynolds et al. (2008)

Predicted Protein Segments [Show List]:

Prediction Image Map

(Place mouse over segments for confidence values.)

Prediction Sequence Map

Legend: Transmembrane Helix, Non-Cytoplasmic, Cytoplasmic, Signal Peptide

(Place mouse over sequence for confidence values.)

      1          11         21         31         41         51         
      |          |          |          |          |          |          
    1 MSYYAFEGLI PVVHPTAFVH PSAVLIGDVI VGAGVYIGPL ASLRGDYGRL IVQAGANIQD  60
   61 GCIMHGYCDT DTIVGENGHI GHGAILHGCL IGRDALVGMN SVIMDGAVIG EESIVAAMSF 120
  121 VKAGFRGEKR QLLMGTPARA VRNVSDDELH WKRLNTKEYQ DLVGRCHVSL HETQPLRQME 180
  181 ENRPRLQGTT DVTPKR

Type	Start	End	Confidence
Non-Cytoplasmic	1	17	0.80
Transmembrane Helix	18	40	0.74
Cytoplasmic	41	196	0.67